Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Gm9440-201ENSMUST00000119667 539 ntBASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Gm27680-201ENSMUST00000184192 160 ntBASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Gm29608-201ENSMUST00000190444 463 ntBASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Gm14301-201ENSMUST00000120181 324 ntBASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Ap1g1-206ENSMUST00000179104 1096 ntBASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Gm42516-201ENSMUST00000198691 767 ntBASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Gm17795-201ENSMUST00000214505 757 ntBASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 AC136019.1-201ENSMUST00000226503 1412 ntBASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lsm11Q8BUV6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Lsm11Q8BUV6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Lsm11Q8BUV6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lsm11Q8BUV6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms