Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Gm10371-202ENSMUST00000228010 1081 ntBASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.6■□□□□ 0.25
Col16a1Q8BLX7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Gm9387-201ENSMUST00000098624 1320 ntBASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Mup-ps26-201ENSMUST00000121751 202 ntBASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col16a1Q8BLX7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Col16a1Q8BLX7 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.58■□□□□ 0.25
Col16a1Q8BLX7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col16a1Q8BLX7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
Col16a1Q8BLX7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 AC129219.2-201ENSMUST00000224324 701 ntBASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col16a1Q8BLX7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Gm8199-201ENSMUST00000121323 823 ntBASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 CT025551.1-201ENSMUST00000223996 692 ntBASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Gm5455-201ENSMUST00000058710 715 ntBASIC16.57■□□□□ 0.24
Col16a1Q8BLX7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms