Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Rubie-203ENSMUST00000227803 2430 ntBASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh20Q8BIZ0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Gm5035-201ENSMUST00000215581 927 ntBASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh20Q8BIZ0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Gm7287-201ENSMUST00000205267 602 ntBASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.59□□□□□ -0.39
Pcdh20Q8BIZ0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Pcdh20Q8BIZ0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh20Q8BIZ0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh20Q8BIZ0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh20Q8BIZ0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh20Q8BIZ0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh20Q8BIZ0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Pcdh20Q8BIZ0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh20Q8BIZ0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh20Q8BIZ0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh20Q8BIZ0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh20Q8BIZ0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms