Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Gm13616-201ENSMUST00000120600 222 ntBASIC13.72□□□□□ -0.21
Trim6Q8BGE7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Gm9522-201ENSMUST00000182394 926 ntBASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim6Q8BGE7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Gm43094-201ENSMUST00000196549 921 ntBASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim6Q8BGE7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.71□□□□□ -0.22
Trim6Q8BGE7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim6Q8BGE7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Gm37935-201ENSMUST00000192012 982 ntBASIC13.7□□□□□ -0.22
Trim6Q8BGE7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms