Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.88□□□□□ -0.67
Smim12Q78RX3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.88□□□□□ -0.67
Smim12Q78RX3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.88□□□□□ -0.67
Smim12Q78RX3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smim12Q78RX3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.87□□□□□ -0.67
Smim12Q78RX3 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.87□□□□□ -0.67
Smim12Q78RX3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Gm16202-201ENSMUST00000117532 544 ntBASIC10.87□□□□□ -0.67
Smim12Q78RX3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.87□□□□□ -0.67
Smim12Q78RX3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Gm6983-201ENSMUST00000214912 628 ntBASIC10.87□□□□□ -0.67
Smim12Q78RX3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.87□□□□□ -0.67
Smim12Q78RX3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.87□□□□□ -0.67
Smim12Q78RX3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smim12Q78RX3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.86□□□□□ -0.67
Smim12Q78RX3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Gm15321-201ENSMUST00000121290 288 ntBASIC10.86□□□□□ -0.67
Smim12Q78RX3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Gm44069-201ENSMUST00000204898 506 ntBASIC10.86□□□□□ -0.67
Smim12Q78RX3 Itm2b-204ENSMUST00000228637 783 ntBASIC10.86□□□□□ -0.67
Smim12Q78RX3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Gm16372-201ENSMUST00000073088 450 ntBASIC10.86□□□□□ -0.67
Smim12Q78RX3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.86□□□□□ -0.67
Smim12Q78RX3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim12Q78RX3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms