Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Gm13315-201ENSMUST00000120376 991 ntBASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Gm27046-201ENSMUST00000182160 463 ntBASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Smchd1Q6P5D8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smchd1Q6P5D8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Gm11439-201ENSMUST00000118598 409 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms