Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col11a2Q64739 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col11a2Q64739 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.24■□□□□ 0.03
Col11a2Q64739 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.24■□□□□ 0.03
Col11a2Q64739 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Col11a2Q64739 Gm12628-201ENSMUST00000122193 382 ntBASIC15.24■□□□□ 0.03
Col11a2Q64739 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Col11a2Q64739 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col11a2Q64739 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Gm42629-201ENSMUST00000199063 1102 ntBASIC15.24■□□□□ 0.03
Col11a2Q64739 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Gm8325-201ENSMUST00000099086 453 ntBASIC15.24■□□□□ 0.03
Col11a2Q64739 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col11a2Q64739 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a2Q64739 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Gm24891-201ENSMUST00000104391 136 ntBASIC15.23■□□□□ 0.03
Col11a2Q64739 Gm8731-201ENSMUST00000118088 412 ntBASIC15.23■□□□□ 0.03
Col11a2Q64739 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.23■□□□□ 0.03
Col11a2Q64739 Gm13263-201ENSMUST00000121271 838 ntBASIC15.23■□□□□ 0.03
Col11a2Q64739 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.23■□□□□ 0.03
Col11a2Q64739 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.23■□□□□ 0.03
Col11a2Q64739 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.23■□□□□ 0.03
Col11a2Q64739 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Col11a2Q64739 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.23■□□□□ 0.03
Col11a2Q64739 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Col11a2Q64739 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.23■□□□□ 0.03
Col11a2Q64739 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC15.23■□□□□ 0.03
Col11a2Q64739 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Gm25076-201ENSMUST00000104098 132 ntBASIC15.23■□□□□ 0.03
Col11a2Q64739 Gm12164-201ENSMUST00000121695 551 ntBASIC15.23■□□□□ 0.03
Col11a2Q64739 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.23■□□□□ 0.03
Col11a2Q64739 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC15.23■□□□□ 0.03
Col11a2Q64739 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 AC166341.2-201ENSMUST00000220571 120 ntBASIC15.23■□□□□ 0.03
Col11a2Q64739 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.23■□□□□ 0.03
Col11a2Q64739 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a2Q64739 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.23■□□□□ 0.03
Col11a2Q64739 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.22■□□□□ 0.03
Col11a2Q64739 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Col11a2Q64739 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Col11a2Q64739 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col11a2Q64739 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.22■□□□□ 0.03
Col11a2Q64739 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.22■□□□□ 0.03
Col11a2Q64739 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Gm25951-201ENSMUST00000175330 64 ntBASIC15.22■□□□□ 0.03
Col11a2Q64739 Gm44158-201ENSMUST00000203881 505 ntBASIC15.22■□□□□ 0.03
Col11a2Q64739 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.22■□□□□ 0.03
Col11a2Q64739 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.22■□□□□ 0.03
Col11a2Q64739 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a2Q64739 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms