Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.44□□□□□ -0.42
Sdc3Q64519 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Gm9823-201ENSMUST00000051212 327 ntBASIC12.44□□□□□ -0.42
Sdc3Q64519 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sdc3Q64519 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.44□□□□□ -0.42
Sdc3Q64519 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.44□□□□□ -0.42
Sdc3Q64519 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.44□□□□□ -0.42
Sdc3Q64519 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.44□□□□□ -0.42
Sdc3Q64519 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Sdc3Q64519 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sdc3Q64519 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.43□□□□□ -0.42
Sdc3Q64519 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sdc3Q64519 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.43□□□□□ -0.42
Sdc3Q64519 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.43□□□□□ -0.42
Sdc3Q64519 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.43□□□□□ -0.42
Sdc3Q64519 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Sdc3Q64519 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Sdc3Q64519 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sdc3Q64519 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Sdc3Q64519 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.43□□□□□ -0.42
Sdc3Q64519 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sdc3Q64519 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Gm16479-201ENSMUST00000121706 932 ntBASIC12.42□□□□□ -0.42
Sdc3Q64519 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.42□□□□□ -0.42
Sdc3Q64519 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.42□□□□□ -0.42
Sdc3Q64519 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.42□□□□□ -0.42
Sdc3Q64519 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.42□□□□□ -0.42
Sdc3Q64519 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms