Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Gm37105-201ENSMUST00000192251 2085 ntBASIC16.36■□□□□ 0.21
Clcn1Q64347 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Clcn1Q64347 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.36■□□□□ 0.21
Clcn1Q64347 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.36■□□□□ 0.21
Clcn1Q64347 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.36■□□□□ 0.21
Clcn1Q64347 Gm11439-201ENSMUST00000118598 409 ntBASIC16.36■□□□□ 0.21
Clcn1Q64347 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.36■□□□□ 0.21
Clcn1Q64347 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.36■□□□□ 0.21
Clcn1Q64347 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.36■□□□□ 0.21
Clcn1Q64347 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.36■□□□□ 0.21
Clcn1Q64347 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Clcn1Q64347 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.36■□□□□ 0.21
Clcn1Q64347 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.36■□□□□ 0.21
Clcn1Q64347 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Gm7114-201ENSMUST00000190159 1789 ntBASIC16.36■□□□□ 0.21
Clcn1Q64347 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Clcn1Q64347 Daam2-202ENSMUST00000224595 1926 ntBASIC16.35■□□□□ 0.21
Clcn1Q64347 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Clcn1Q64347 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.35■□□□□ 0.21
Clcn1Q64347 Gm14028-201ENSMUST00000117434 479 ntBASIC16.35■□□□□ 0.21
Clcn1Q64347 Gm4760-201ENSMUST00000119663 1030 ntBASIC16.35■□□□□ 0.21
Clcn1Q64347 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Clcn1Q64347 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.35■□□□□ 0.21
Clcn1Q64347 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.35■□□□□ 0.21
Clcn1Q64347 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC16.35■□□□□ 0.21
Clcn1Q64347 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Clcn1Q64347 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.35■□□□□ 0.21
Clcn1Q64347 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.35■□□□□ 0.21
Clcn1Q64347 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn1Q64347 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.35■□□□□ 0.21
Clcn1Q64347 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Gm27196-201ENSMUST00000184787 2582 ntBASIC16.34■□□□□ 0.21
Clcn1Q64347 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Clcn1Q64347 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC16.34■□□□□ 0.21
Clcn1Q64347 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.34■□□□□ 0.21
Clcn1Q64347 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.34■□□□□ 0.21
Clcn1Q64347 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.34■□□□□ 0.21
Clcn1Q64347 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.34■□□□□ 0.21
Clcn1Q64347 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Clcn1Q64347 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn1Q64347 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clcn1Q64347 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms