Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox4Q06831 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox4Q06831 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.7□□□□□ -0.38
Sox4Q06831 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox4Q06831 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox4Q06831 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox4Q06831 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox4Q06831 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox4Q06831 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox4Q06831 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.69□□□□□ -0.38
Sox4Q06831 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.69□□□□□ -0.38
Sox4Q06831 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox4Q06831 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox4Q06831 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Gm11591-201ENSMUST00000120063 702 ntBASIC12.69□□□□□ -0.38
Sox4Q06831 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sox4Q06831 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.69□□□□□ -0.38
Sox4Q06831 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.69□□□□□ -0.38
Sox4Q06831 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Sox4Q06831 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sox4Q06831 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sox4Q06831 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox4Q06831 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sox4Q06831 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sox4Q06831 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Sox4Q06831 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox4Q06831 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.68□□□□□ -0.38
Sox4Q06831 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox4Q06831 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.68□□□□□ -0.38
Sox4Q06831 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox4Q06831 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sox4Q06831 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Gm19184-201ENSMUST00000196798 928 ntBASIC12.68□□□□□ -0.38
Sox4Q06831 Gm43630-201ENSMUST00000201550 776 ntBASIC12.68□□□□□ -0.38
Sox4Q06831 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.68□□□□□ -0.38
Sox4Q06831 Gm45880-201ENSMUST00000213041 853 ntBASIC12.68□□□□□ -0.38
Sox4Q06831 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sox4Q06831 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.68□□□□□ -0.38
Sox4Q06831 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Sox4Q06831 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox4Q06831 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.67□□□□□ -0.38
Sox4Q06831 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox4Q06831 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox4Q06831 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms