Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.84□□□□□ -0.35
Atxn1P54254 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atxn1P54254 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Atxn1P54254 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.83□□□□□ -0.35
Atxn1P54254 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.83□□□□□ -0.35
Atxn1P54254 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.83□□□□□ -0.36
Atxn1P54254 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.83□□□□□ -0.36
Atxn1P54254 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.83□□□□□ -0.36
Atxn1P54254 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.83□□□□□ -0.36
Atxn1P54254 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.83□□□□□ -0.36
Atxn1P54254 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.83□□□□□ -0.36
Atxn1P54254 Gm9550-201ENSMUST00000161130 862 ntBASIC12.83□□□□□ -0.36
Atxn1P54254 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.83□□□□□ -0.36
Atxn1P54254 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.83□□□□□ -0.36
Atxn1P54254 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Atxn1P54254 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.83□□□□□ -0.36
Atxn1P54254 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Atxn1P54254 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Atxn1P54254 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atxn1P54254 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.82□□□□□ -0.36
Atxn1P54254 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Atxn1P54254 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.82□□□□□ -0.36
Atxn1P54254 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.82□□□□□ -0.36
Atxn1P54254 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.82□□□□□ -0.36
Atxn1P54254 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm15770-201ENSMUST00000117498 584 ntBASIC12.82□□□□□ -0.36
Atxn1P54254 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.82□□□□□ -0.36
Atxn1P54254 Gm8566-201ENSMUST00000120174 465 ntBASIC12.82□□□□□ -0.36
Atxn1P54254 Gm16479-201ENSMUST00000121706 932 ntBASIC12.82□□□□□ -0.36
Atxn1P54254 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.82□□□□□ -0.36
Atxn1P54254 Gm13316-201ENSMUST00000140537 691 ntBASIC12.82□□□□□ -0.36
Atxn1P54254 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.82□□□□□ -0.36
Atxn1P54254 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Atxn1P54254 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Atxn1P54254 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Atxn1P54254 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Atxn1P54254 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atxn1P54254 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.81□□□□□ -0.36
Atxn1P54254 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.81□□□□□ -0.36
Atxn1P54254 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atxn1P54254 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.81□□□□□ -0.36
Atxn1P54254 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms