Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sox2P48432 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Sox2P48432 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox2P48432 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sox2P48432 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Sox2P48432 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox2P48432 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox2P48432 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sox2P48432 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox2P48432 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.08□□□□□ -0.48
Sox2P48432 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.08□□□□□ -0.48
Sox2P48432 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.08□□□□□ -0.48
Sox2P48432 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sox2P48432 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sox2P48432 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Sox2P48432 Gm14701-201ENSMUST00000117156 348 ntBASIC12.08□□□□□ -0.48
Sox2P48432 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.08□□□□□ -0.48
Sox2P48432 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.08□□□□□ -0.48
Sox2P48432 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Gm9522-201ENSMUST00000182394 926 ntBASIC12.08□□□□□ -0.48
Sox2P48432 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox2P48432 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.08□□□□□ -0.48
Sox2P48432 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.08□□□□□ -0.48
Sox2P48432 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox2P48432 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.08□□□□□ -0.48
Sox2P48432 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox2P48432 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sox2P48432 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sox2P48432 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox2P48432 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox2P48432 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.07□□□□□ -0.48
Sox2P48432 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Sox2P48432 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Sox2P48432 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox2P48432 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Sox2P48432 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox2P48432 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox2P48432 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sox2P48432 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.07□□□□□ -0.48
Sox2P48432 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox2P48432 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.07□□□□□ -0.48
Sox2P48432 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox2P48432 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sox2P48432 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Sox2P48432 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox2P48432 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms