Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox18P43680 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox18P43680 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox18P43680 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox18P43680 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Sox18P43680 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox18P43680 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Sox18P43680 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.48□□□□□ -0.41
Sox18P43680 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sox18P43680 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Sox18P43680 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.47□□□□□ -0.41
Sox18P43680 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox18P43680 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox18P43680 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox18P43680 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox18P43680 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox18P43680 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Gm27046-201ENSMUST00000182160 463 ntBASIC12.47□□□□□ -0.41
Sox18P43680 Gm2445-201ENSMUST00000182798 989 ntBASIC12.47□□□□□ -0.41
Sox18P43680 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox18P43680 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.47□□□□□ -0.41
Sox18P43680 Gm42474-201ENSMUST00000201073 505 ntBASIC12.47□□□□□ -0.41
Sox18P43680 Gm44262-201ENSMUST00000204969 372 ntBASIC12.47□□□□□ -0.41
Sox18P43680 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox18P43680 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox18P43680 CT025552.1-201ENSMUST00000224561 521 ntBASIC12.47□□□□□ -0.41
Sox18P43680 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox18P43680 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox18P43680 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sox18P43680 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Sox18P43680 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sox18P43680 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox18P43680 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.47□□□□□ -0.41
Sox18P43680 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox18P43680 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sox18P43680 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.46□□□□□ -0.41
Sox18P43680 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.46□□□□□ -0.41
Sox18P43680 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox18P43680 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sox18P43680 Gm25214-201ENSMUST00000104573 129 ntBASIC12.46□□□□□ -0.41
Sox18P43680 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sox18P43680 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sox18P43680 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.46□□□□□ -0.41
Sox18P43680 Gm8566-201ENSMUST00000120174 465 ntBASIC12.46□□□□□ -0.41
Sox18P43680 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox18P43680 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Gm42516-201ENSMUST00000198691 767 ntBASIC12.46□□□□□ -0.41
Sox18P43680 Gm44405-201ENSMUST00000198952 126 ntBASIC12.46□□□□□ -0.41
Sox18P43680 Gm45770-201ENSMUST00000212105 616 ntBASIC12.46□□□□□ -0.41
Sox18P43680 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.46□□□□□ -0.41
Sox18P43680 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.46□□□□□ -0.41
Sox18P43680 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.46□□□□□ -0.41
Sox18P43680 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox18P43680 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Sox18P43680 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox18P43680 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox18P43680 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms