Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd27P41272 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd27P41272 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd27P41272 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cd27P41272 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd27P41272 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.36□□□□□ -0.75
Cd27P41272 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd27P41272 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cd27P41272 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd27P41272 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cd27P41272 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.36□□□□□ -0.75
Cd27P41272 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd27P41272 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cd27P41272 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cd27P41272 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Cd27P41272 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.35□□□□□ -0.75
Cd27P41272 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Cd27P41272 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.35□□□□□ -0.75
Cd27P41272 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.35□□□□□ -0.75
Cd27P41272 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cd27P41272 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cd27P41272 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Cd27P41272 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Cd27P41272 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cd27P41272 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Cd27P41272 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.35□□□□□ -0.75
Cd27P41272 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Cd27P41272 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.35□□□□□ -0.75
Cd27P41272 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.35□□□□□ -0.75
Cd27P41272 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Cd27P41272 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.35□□□□□ -0.75
Cd27P41272 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cd27P41272 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cd27P41272 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Cd27P41272 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.34□□□□□ -0.75
Cd27P41272 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cd27P41272 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cd27P41272 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cd27P41272 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cd27P41272 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cd27P41272 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Cd27P41272 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cd27P41272 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cd27P41272 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cd27P41272 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.34□□□□□ -0.75
Cd27P41272 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cd27P41272 Gm12384-201ENSMUST00000119228 919 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms