Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.72□□□□□ -0.37
HmgclP38060 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.72□□□□□ -0.37
HmgclP38060 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HmgclP38060 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
HmgclP38060 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HmgclP38060 Gm43818-201ENSMUST00000200605 466 ntBASIC12.72□□□□□ -0.37
HmgclP38060 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
HmgclP38060 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.72□□□□□ -0.37
HmgclP38060 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HmgclP38060 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HmgclP38060 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HmgclP38060 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.71□□□□□ -0.37
HmgclP38060 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HmgclP38060 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
HmgclP38060 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.71□□□□□ -0.37
HmgclP38060 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.71□□□□□ -0.37
HmgclP38060 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HmgclP38060 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HmgclP38060 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.71□□□□□ -0.37
HmgclP38060 Gm12363-201ENSMUST00000122250 668 ntBASIC12.71□□□□□ -0.37
HmgclP38060 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Gm23363-201ENSMUST00000175024 79 ntBASIC12.71□□□□□ -0.37
HmgclP38060 Gm27682-201ENSMUST00000183930 110 ntBASIC12.71□□□□□ -0.37
HmgclP38060 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.71□□□□□ -0.37
HmgclP38060 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HmgclP38060 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HmgclP38060 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HmgclP38060 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
HmgclP38060 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HmgclP38060 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
HmgclP38060 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HmgclP38060 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HmgclP38060 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HmgclP38060 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.7□□□□□ -0.38
HmgclP38060 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HmgclP38060 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
HmgclP38060 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.7□□□□□ -0.38
HmgclP38060 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.7□□□□□ -0.38
HmgclP38060 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.7□□□□□ -0.38
HmgclP38060 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HmgclP38060 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.7□□□□□ -0.38
HmgclP38060 Gm6266-201ENSMUST00000203844 806 ntBASIC12.7□□□□□ -0.38
HmgclP38060 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.7□□□□□ -0.38
HmgclP38060 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.7□□□□□ -0.38
HmgclP38060 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Gm10268-201ENSMUST00000085340 555 ntBASIC12.7□□□□□ -0.38
HmgclP38060 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HmgclP38060 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HmgclP38060 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HmgclP38060 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms