Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.35□□□□□ -0.11
Gjb1P28230 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gjb1P28230 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Gjb1P28230 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gjb1P28230 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.34□□□□□ -0.11
Gjb1P28230 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gjb1P28230 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gjb1P28230 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gjb1P28230 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.34□□□□□ -0.11
Gjb1P28230 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gjb1P28230 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Gm12165-201ENSMUST00000117047 342 ntBASIC14.34□□□□□ -0.11
Gjb1P28230 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.34□□□□□ -0.11
Gjb1P28230 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.34□□□□□ -0.11
Gjb1P28230 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.34□□□□□ -0.11
Gjb1P28230 Gm10051-201ENSMUST00000145209 414 ntBASIC14.34□□□□□ -0.11
Gjb1P28230 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.34□□□□□ -0.11
Gjb1P28230 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.34□□□□□ -0.11
Gjb1P28230 Gm38092-201ENSMUST00000195600 653 ntBASIC14.34□□□□□ -0.11
Gjb1P28230 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.34□□□□□ -0.11
Gjb1P28230 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.34□□□□□ -0.11
Gjb1P28230 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.34□□□□□ -0.11
Gjb1P28230 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gjb1P28230 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.34□□□□□ -0.11
Gjb1P28230 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gjb1P28230 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Gjb1P28230 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gjb1P28230 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.34□□□□□ -0.11
Gjb1P28230 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gjb1P28230 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gjb1P28230 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gjb1P28230 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gjb1P28230 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.33□□□□□ -0.11
Gjb1P28230 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gjb1P28230 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.33□□□□□ -0.12
Gjb1P28230 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gjb1P28230 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.33□□□□□ -0.12
Gjb1P28230 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.33□□□□□ -0.12
Gjb1P28230 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gjb1P28230 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.33□□□□□ -0.12
Gjb1P28230 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.33□□□□□ -0.12
Gjb1P28230 Gm43916-201ENSMUST00000205062 967 ntBASIC14.33□□□□□ -0.12
Gjb1P28230 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.33□□□□□ -0.12
Gjb1P28230 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.33□□□□□ -0.12
Gjb1P28230 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.33□□□□□ -0.12
Gjb1P28230 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Gjb1P28230 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gjb1P28230 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms