Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SnrpbP27048 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.51□□□□□ -0.57
SnrpbP27048 Gm18889-201ENSMUST00000174284 929 ntBASIC11.51□□□□□ -0.57
SnrpbP27048 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC11.51□□□□□ -0.57
SnrpbP27048 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Gm43952-201ENSMUST00000203765 751 ntBASIC11.51□□□□□ -0.57
SnrpbP27048 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC11.51□□□□□ -0.57
SnrpbP27048 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.51□□□□□ -0.57
SnrpbP27048 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.51□□□□□ -0.57
SnrpbP27048 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
SnrpbP27048 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.51□□□□□ -0.57
SnrpbP27048 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.51□□□□□ -0.57
SnrpbP27048 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.51□□□□□ -0.57
SnrpbP27048 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SnrpbP27048 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SnrpbP27048 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SnrpbP27048 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SnrpbP27048 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SnrpbP27048 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.5□□□□□ -0.57
SnrpbP27048 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.5□□□□□ -0.57
SnrpbP27048 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
SnrpbP27048 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.5□□□□□ -0.57
SnrpbP27048 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.5□□□□□ -0.57
SnrpbP27048 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.5□□□□□ -0.57
SnrpbP27048 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.5□□□□□ -0.57
SnrpbP27048 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.5□□□□□ -0.57
SnrpbP27048 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SnrpbP27048 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
SnrpbP27048 Gm8988-201ENSMUST00000155015 1240 ntBASIC11.5□□□□□ -0.57
SnrpbP27048 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Gm24420-201ENSMUST00000176676 59 ntBASIC11.5□□□□□ -0.57
SnrpbP27048 Gm10925-201ENSMUST00000189941 678 ntBASIC11.5□□□□□ -0.57
SnrpbP27048 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.5□□□□□ -0.57
SnrpbP27048 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.5□□□□□ -0.57
SnrpbP27048 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
SnrpbP27048 CT030185.2-201ENSMUST00000222614 1310 ntBASIC11.5□□□□□ -0.57
SnrpbP27048 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.5□□□□□ -0.57
SnrpbP27048 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SnrpbP27048 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SnrpbP27048 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.49□□□□□ -0.57
SnrpbP27048 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SnrpbP27048 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
SnrpbP27048 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SnrpbP27048 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SnrpbP27048 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SnrpbP27048 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.49□□□□□ -0.57
SnrpbP27048 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms