Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa4P06798 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa4P06798 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa4P06798 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Gm9899-201ENSMUST00000065519 555 ntBASIC12.7□□□□□ -0.38
Hoxa4P06798 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa4P06798 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa4P06798 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa4P06798 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa4P06798 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa4P06798 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa4P06798 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa4P06798 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa4P06798 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Hoxa4P06798 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxa4P06798 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hoxa4P06798 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.69□□□□□ -0.38
Hoxa4P06798 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.69□□□□□ -0.38
Hoxa4P06798 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Gm42693-201ENSMUST00000196779 631 ntBASIC12.69□□□□□ -0.38
Hoxa4P06798 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.69□□□□□ -0.38
Hoxa4P06798 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.69□□□□□ -0.38
Hoxa4P06798 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxa4P06798 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxa4P06798 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.69□□□□□ -0.38
Hoxa4P06798 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxa4P06798 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxa4P06798 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hoxa4P06798 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxa4P06798 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa4P06798 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.68□□□□□ -0.38
Hoxa4P06798 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.68□□□□□ -0.38
Hoxa4P06798 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.68□□□□□ -0.38
Hoxa4P06798 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.68□□□□□ -0.38
Hoxa4P06798 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Gm45880-201ENSMUST00000213041 853 ntBASIC12.68□□□□□ -0.38
Hoxa4P06798 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.68□□□□□ -0.38
Hoxa4P06798 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hoxa4P06798 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxa4P06798 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa4P06798 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms