Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.99□□□□□ -0.49
BckdkO55028 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.99□□□□□ -0.49
BckdkO55028 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.99□□□□□ -0.49
BckdkO55028 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.99□□□□□ -0.49
BckdkO55028 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Gm10478-201ENSMUST00000084451 396 ntBASIC11.99□□□□□ -0.49
BckdkO55028 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.99□□□□□ -0.49
BckdkO55028 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.99□□□□□ -0.49
BckdkO55028 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
BckdkO55028 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
BckdkO55028 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
BckdkO55028 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.99□□□□□ -0.49
BckdkO55028 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BckdkO55028 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
BckdkO55028 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
BckdkO55028 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
BckdkO55028 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.98□□□□□ -0.49
BckdkO55028 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.98□□□□□ -0.49
BckdkO55028 Gm8810-201ENSMUST00000172895 754 ntBASIC11.98□□□□□ -0.49
BckdkO55028 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.98□□□□□ -0.49
BckdkO55028 Proscos-202ENSMUST00000178990 666 ntBASIC11.98□□□□□ -0.49
BckdkO55028 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.98□□□□□ -0.49
BckdkO55028 Gm29608-201ENSMUST00000190444 463 ntBASIC11.98□□□□□ -0.49
BckdkO55028 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.98□□□□□ -0.49
BckdkO55028 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.98□□□□□ -0.49
BckdkO55028 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.98□□□□□ -0.49
BckdkO55028 Gm8598-201ENSMUST00000221184 836 ntBASIC11.98□□□□□ -0.49
BckdkO55028 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Gm16372-201ENSMUST00000073088 450 ntBASIC11.98□□□□□ -0.49
BckdkO55028 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
BckdkO55028 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.98□□□□□ -0.49
BckdkO55028 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BckdkO55028 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.98□□□□□ -0.49
BckdkO55028 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.97□□□□□ -0.49
BckdkO55028 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.97□□□□□ -0.49
BckdkO55028 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.97□□□□□ -0.49
BckdkO55028 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.97□□□□□ -0.49
BckdkO55028 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.97□□□□□ -0.49
BckdkO55028 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.97□□□□□ -0.49
BckdkO55028 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.97□□□□□ -0.49
BckdkO55028 Gm12403-201ENSMUST00000121384 959 ntBASIC11.97□□□□□ -0.49
BckdkO55028 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.97□□□□□ -0.49
BckdkO55028 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
BckdkO55028 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
BckdkO55028 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.97□□□□□ -0.49
BckdkO55028 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.97□□□□□ -0.49
BckdkO55028 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.97□□□□□ -0.49
BckdkO55028 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.97□□□□□ -0.49
BckdkO55028 Gm5370-201ENSMUST00000187187 574 ntBASIC11.97□□□□□ -0.49
BckdkO55028 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.97□□□□□ -0.49
BckdkO55028 Gm6007-201ENSMUST00000208170 823 ntBASIC11.97□□□□□ -0.49
BckdkO55028 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.97□□□□□ -0.49
BckdkO55028 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.97□□□□□ -0.49
BckdkO55028 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.97□□□□□ -0.49
BckdkO55028 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms