Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4340L7N2C4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Gm11930-201ENSMUST00000117788 190 ntBASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Gm37201-201ENSMUST00000191845 523 ntBASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4340L7N2C4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4340L7N2C4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4340L7N2C4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4340L7N2C4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.33■□□□□ 0.05
Gm4340L7N2C4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm24830-201ENSMUST00000102024 166 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm15703-201ENSMUST00000120250 880 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm25890-201ENSMUST00000177643 165 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm22614-201ENSMUST00000178300 165 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm22042-201ENSMUST00000082989 165 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm26232-201ENSMUST00000083360 166 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm24136-201ENSMUST00000083374 165 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm26110-201ENSMUST00000083971 165 ntBASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4340L7N2C4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4340L7N2C4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Gm15547-201ENSMUST00000122152 333 ntBASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.32■□□□□ 0.04
Gm4340L7N2C4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms