Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Gm26013-201ENSMUST00000104404 119 ntBASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Gm8100-201ENSMUST00000182906 988 ntBASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Gm8531-201ENSMUST00000188319 893 ntBASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Gm29410-201ENSMUST00000188383 694 ntBASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Gm44158-201ENSMUST00000203881 505 ntBASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Gm45594-201ENSMUST00000211717 241 ntBASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Gm8768-201ENSMUST00000220020 826 ntBASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc188F6WEU2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Gm25063-201ENSMUST00000104666 94 ntBASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Gm12036-201ENSMUST00000120008 530 ntBASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Trav11n-201ENSMUST00000200113 343 ntBASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Gm26448-201ENSMUST00000082446 203 ntBASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Gm10288-201ENSMUST00000084614 537 ntBASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc188F6WEU2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Gm11989-201ENSMUST00000117240 672 ntBASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Gm11362-201ENSMUST00000118838 850 ntBASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Gm13315-201ENSMUST00000120376 991 ntBASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.9□□□□□ -0.34
Ccdc188F6WEU2 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms