Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm14719-201ENSMUST00000121891 340 ntBASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm24420-201ENSMUST00000176676 59 ntBASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 AC132863.2-201ENSMUST00000226643 799 ntBASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 AC132467.2-202ENSMUST00000227726 559 ntBASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav6n-6A0A075B6B2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Trav6n-6A0A075B6B2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Mir698-201ENSMUST00000102164 109 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm24694-201ENSMUST00000180054 110 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm27663-201ENSMUST00000184839 110 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav6n-6A0A075B6B2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms