Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClcnkaQ9WUB7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Gm16202-201ENSMUST00000117532 544 ntBASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Gm27892-201ENSMUST00000185017 106 ntBASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Gm17794-201ENSMUST00000220252 955 ntBASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClcnkaQ9WUB7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Gm11478-201ENSMUST00000117851 599 ntBASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Gm11424-201ENSMUST00000121929 829 ntBASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Mir1894-201ENSMUST00000122802 81 ntBASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Gm44069-201ENSMUST00000204898 506 ntBASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.92□□□□□ -0.5
ClcnkaQ9WUB7 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.91□□□□□ -0.5
ClcnkaQ9WUB7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms