Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Gm16296-201ENSMUST00000159905 325 ntBASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Mir7085-201ENSMUST00000184353 66 ntBASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3aQ9JKX8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3aQ9JKX8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Gm7809-201ENSMUST00000153199 742 ntBASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Gm18584-201ENSMUST00000203098 964 ntBASIC12.4□□□□□ -0.42
Upk3aQ9JKX8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms