Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssr1Q9CY50 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Gm15376-201ENSMUST00000122258 783 ntBASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Gm24447-201ENSMUST00000083977 338 ntBASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Syt7-204ENSMUST00000223586 1344 ntBASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssr1Q9CY50 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ssr1Q9CY50 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ssr1Q9CY50 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ssr1Q9CY50 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ssr1Q9CY50 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Gm11524-201ENSMUST00000119349 807 ntBASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Gm24694-201ENSMUST00000180054 110 ntBASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Gm27663-201ENSMUST00000184839 110 ntBASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Gm45841-201ENSMUST00000207700 164 ntBASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 AC124433.1-202ENSMUST00000224762 1535 ntBASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.08□□□□□ -0.16
Ssr1Q9CY50 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Gm14057-201ENSMUST00000120631 482 ntBASIC14.07□□□□□ -0.16
Ssr1Q9CY50 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Gm19078-201ENSMUST00000206311 727 ntBASIC14.07□□□□□ -0.16
Ssr1Q9CY50 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms