Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.18■□□□□ 0.02
Smc3Q9CW03 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc3Q9CW03 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smc3Q9CW03 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Mir686-201ENSMUST00000102174 109 ntBASIC15.17■□□□□ 0.02
Smc3Q9CW03 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Gm5687-201ENSMUST00000118252 640 ntBASIC15.17■□□□□ 0.02
Smc3Q9CW03 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Mir7654-201ENSMUST00000185082 70 ntBASIC15.17■□□□□ 0.02
Smc3Q9CW03 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.17■□□□□ 0.02
Smc3Q9CW03 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.17■□□□□ 0.02
Smc3Q9CW03 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.17■□□□□ 0.02
Smc3Q9CW03 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc3Q9CW03 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.17■□□□□ 0.02
Smc3Q9CW03 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.16■□□□□ 0.02
Smc3Q9CW03 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Gm15429-201ENSMUST00000151268 798 ntBASIC15.16■□□□□ 0.02
Smc3Q9CW03 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.16■□□□□ 0.02
Smc3Q9CW03 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Gm44069-201ENSMUST00000204898 506 ntBASIC15.16■□□□□ 0.02
Smc3Q9CW03 Gm6458-201ENSMUST00000211573 635 ntBASIC15.16■□□□□ 0.02
Smc3Q9CW03 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.16■□□□□ 0.02
Smc3Q9CW03 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc3Q9CW03 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 127.2 ms