Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Otud1Q9CUB6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Otud1Q9CUB6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Otud1Q9CUB6 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.27□□□□□ -0.44
Otud1Q9CUB6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.27□□□□□ -0.44
Otud1Q9CUB6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Otud1Q9CUB6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Snord83b-201ENSMUST00000104546 94 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Mir874-201ENSMUST00000104769 76 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gm14704-201ENSMUST00000120300 874 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gm4768-201ENSMUST00000206199 686 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gm7399-201ENSMUST00000032395 858 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Otud1Q9CUB6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Mir6420-201ENSMUST00000185032 102 ntBASIC12.26□□□□□ -0.45
Otud1Q9CUB6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gm43133-201ENSMUST00000197472 463 ntBASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gm43118-201ENSMUST00000199149 775 ntBASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Otud1Q9CUB6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Otud1Q9CUB6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms