Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Matn2-203ENSMUST00000226766 3252 ntBASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.23□□□□□ -0.45
Ska1Q9CPV1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Gm12485-201ENSMUST00000119641 291 ntBASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Gm5279-201ENSMUST00000199575 745 ntBASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Gm5161-201ENSMUST00000075243 853 ntBASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Gm24447-201ENSMUST00000083977 338 ntBASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm14719-201ENSMUST00000121891 340 ntBASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.22□□□□□ -0.45
Ska1Q9CPV1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm29667-201ENSMUST00000190817 490 ntBASIC12.22□□□□□ -0.45
Ska1Q9CPV1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.22□□□□□ -0.45
Ska1Q9CPV1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ska1Q9CPV1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms