Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdk9Q99J95 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Gm13223-201ENSMUST00000118609 747 ntBASIC13.03□□□□□ -0.32
Cdk9Q99J95 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.03□□□□□ -0.32
Cdk9Q99J95 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.03□□□□□ -0.32
Cdk9Q99J95 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.03□□□□□ -0.32
Cdk9Q99J95 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk9Q99J95 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk9Q99J95 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Gm13453-201ENSMUST00000118708 357 ntBASIC13.02□□□□□ -0.33
Cdk9Q99J95 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Gm6888-201ENSMUST00000221983 706 ntBASIC13.02□□□□□ -0.33
Cdk9Q99J95 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk9Q99J95 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdk9Q99J95 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms