Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HnrnpuQ8VEK3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HnrnpuQ8VEK3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HnrnpuQ8VEK3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HnrnpuQ8VEK3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HnrnpuQ8VEK3 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.09■□□□□ 0.17
HnrnpuQ8VEK3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HnrnpuQ8VEK3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HnrnpuQ8VEK3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HnrnpuQ8VEK3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HnrnpuQ8VEK3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.08■□□□□ 0.17
HnrnpuQ8VEK3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.08■□□□□ 0.17
HnrnpuQ8VEK3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HnrnpuQ8VEK3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HnrnpuQ8VEK3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HnrnpuQ8VEK3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HnrnpuQ8VEK3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Gm13813-201ENSMUST00000120998 787 ntBASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HnrnpuQ8VEK3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HnrnpuQ8VEK3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Gm13369-201ENSMUST00000119442 987 ntBASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Gm16479-201ENSMUST00000121706 932 ntBASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Gm26185-201ENSMUST00000157692 266 ntBASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Gm22331-201ENSMUST00000158066 136 ntBASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Gm37324-201ENSMUST00000194500 4504 ntBASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HnrnpuQ8VEK3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HnrnpuQ8VEK3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HnrnpuQ8VEK3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms