Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.8■□□□□ 0.28
Ddx54Q8K4L0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Gm25881-201ENSMUST00000157783 103 ntBASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Gm37028-201ENSMUST00000194276 107 ntBASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Gm45398-201ENSMUST00000210561 165 ntBASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ddx54Q8K4L0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Gm9230-201ENSMUST00000188228 532 ntBASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Gm3028-201ENSMUST00000213805 1119 ntBASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx54Q8K4L0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm13812-201ENSMUST00000118061 1347 ntBASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm13810-201ENSMUST00000118584 1347 ntBASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm12816-201ENSMUST00000118069 1212 ntBASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm15573-201ENSMUST00000119487 540 ntBASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm18038-201ENSMUST00000197900 485 ntBASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 Gm42682-201ENSMUST00000198349 1265 ntBASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx54Q8K4L0 AC156501.1-201ENSMUST00000228219 270 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms