Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Gm15824-201ENSMUST00000119516 955 ntBASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Gm13829-201ENSMUST00000119600 138 ntBASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Gm12363-201ENSMUST00000122250 668 ntBASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.93□□□□□ -0.02
Rtn1Q8K0T0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Gm1335-201ENSMUST00000121653 386 ntBASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Gm22121-201ENSMUST00000175148 54 ntBASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Gm26927-201ENSMUST00000182385 965 ntBASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Gm2594-201ENSMUST00000214774 742 ntBASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Gm19163-201ENSMUST00000223313 780 ntBASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Gm10268-201ENSMUST00000085340 555 ntBASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rtn1Q8K0T0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rtn1Q8K0T0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rtn1Q8K0T0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rtn1Q8K0T0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rtn1Q8K0T0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms