Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cps1Q8C196 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.04■□□□□ 0.32
Cps1Q8C196 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Cps1Q8C196 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.04■□□□□ 0.32
Cps1Q8C196 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Gm9387-201ENSMUST00000098624 1320 ntBASIC17.04■□□□□ 0.32
Cps1Q8C196 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC17.04■□□□□ 0.32
Cps1Q8C196 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cps1Q8C196 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Cps1Q8C196 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC17.04■□□□□ 0.32
Cps1Q8C196 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
Cps1Q8C196 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC17.04■□□□□ 0.32
Cps1Q8C196 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 AC154290.1-201ENSMUST00000223786 1240 ntBASIC17.04■□□□□ 0.32
Cps1Q8C196 AC159103.1-201ENSMUST00000228325 429 ntBASIC17.04■□□□□ 0.32
Cps1Q8C196 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cps1Q8C196 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cps1Q8C196 AC130671.2-201ENSMUST00000227224 1621 ntBASIC17.04■□□□□ 0.32
Cps1Q8C196 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.04■□□□□ 0.32
Cps1Q8C196 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Cps1Q8C196 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Cps1Q8C196 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Gm13809-201ENSMUST00000117921 597 ntBASIC17.03■□□□□ 0.32
Cps1Q8C196 Gm14760-201ENSMUST00000121831 999 ntBASIC17.03■□□□□ 0.32
Cps1Q8C196 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC17.03■□□□□ 0.32
Cps1Q8C196 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cps1Q8C196 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Gm44401-201ENSMUST00000204462 2375 ntBASIC17.03■□□□□ 0.32
Cps1Q8C196 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Cps1Q8C196 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cps1Q8C196 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.02■□□□□ 0.32
Cps1Q8C196 Gm2965-201ENSMUST00000198365 343 ntBASIC17.02■□□□□ 0.32
Cps1Q8C196 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC17.02■□□□□ 0.32
Cps1Q8C196 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC17.02■□□□□ 0.32
Cps1Q8C196 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cps1Q8C196 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cps1Q8C196 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cps1Q8C196 Gm5847-201ENSMUST00000178959 1595 ntBASIC17.02■□□□□ 0.32
Cps1Q8C196 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cps1Q8C196 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cps1Q8C196 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC17.02■□□□□ 0.32
Cps1Q8C196 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cps1Q8C196 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cps1Q8C196 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cps1Q8C196 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC17.02■□□□□ 0.31
Cps1Q8C196 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cps1Q8C196 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cps1Q8C196 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cps1Q8C196 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cps1Q8C196 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cps1Q8C196 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cps1Q8C196 Gm43045-201ENSMUST00000198725 2095 ntBASIC17.01■□□□□ 0.31
Cps1Q8C196 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cps1Q8C196 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cps1Q8C196 Gm15573-201ENSMUST00000119487 540 ntBASIC17.01■□□□□ 0.31
Cps1Q8C196 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Cps1Q8C196 Gm7666-201ENSMUST00000146631 819 ntBASIC17.01■□□□□ 0.31
Cps1Q8C196 Gm6397-201ENSMUST00000161973 1069 ntBASIC17.01■□□□□ 0.31
Cps1Q8C196 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC17.01■□□□□ 0.31
Cps1Q8C196 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cps1Q8C196 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cps1Q8C196 CT485607.1-201ENSMUST00000216100 85 ntBASIC17.01■□□□□ 0.31
Cps1Q8C196 AC151275.1-201ENSMUST00000224870 585 ntBASIC17.01■□□□□ 0.31
Cps1Q8C196 Gm26448-201ENSMUST00000082446 203 ntBASIC17.01■□□□□ 0.31
Cps1Q8C196 Gm7551-201ENSMUST00000089593 1074 ntBASIC17.01■□□□□ 0.31
Cps1Q8C196 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cps1Q8C196 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cps1Q8C196 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cps1Q8C196 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.01■□□□□ 0.31
Cps1Q8C196 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms