Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Syt7-204ENSMUST00000223586 1344 ntBASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2bQ8BJF9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Gm13689-201ENSMUST00000119360 685 ntBASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2bQ8BJF9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Gm5354-201ENSMUST00000182417 973 ntBASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2bQ8BJF9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2bQ8BJF9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms