Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf38Q8BI21 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Gm7488-201ENSMUST00000117148 684 ntBASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf38Q8BI21 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf38Q8BI21 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf38Q8BI21 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms