Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Matn2-206ENSMUST00000228570 2798 ntBASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh19Q80TF3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Gm13342-201ENSMUST00000121055 207 ntBASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Gm22121-201ENSMUST00000175148 54 ntBASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Gm5904-201ENSMUST00000210286 865 ntBASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh19Q80TF3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Gm13786-201ENSMUST00000122371 333 ntBASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Gm24548-201ENSMUST00000158650 108 ntBASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Gm8738-201ENSMUST00000172606 329 ntBASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Gm23363-201ENSMUST00000175024 79 ntBASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh19Q80TF3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms