Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh8Q7TSK3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Gm29396-201ENSMUST00000185659 716 ntBASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh8Q7TSK3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm11591-201ENSMUST00000120063 702 ntBASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh8Q7TSK3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh8Q7TSK3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms