Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd4Q6PDQ2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 AY036118-201ENSMUST00000200021 923 ntBASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Gm10371-202ENSMUST00000228010 1081 ntBASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Mir6546-201ENSMUST00000184460 62 ntBASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.55■□□□□ 0.24
Chd4Q6PDQ2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Gm17391-201ENSMUST00000171036 126 ntBASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Gm21027-201ENSMUST00000219300 1236 ntBASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd4Q6PDQ2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gm13408-201ENSMUST00000119822 798 ntBASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gm13935-201ENSMUST00000121859 798 ntBASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Mir1943-201ENSMUST00000158276 73 ntBASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Olfr1347-205ENSMUST00000220413 964 ntBASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gm5419-201ENSMUST00000119301 527 ntBASIC16.53■□□□□ 0.24
Chd4Q6PDQ2 Gm11450-201ENSMUST00000121144 333 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms