Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col11a2Q64739 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col11a2Q64739 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col11a2Q64739 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.27■□□□□ 0.04
Col11a2Q64739 Gm7722-201ENSMUST00000120646 741 ntBASIC15.27■□□□□ 0.04
Col11a2Q64739 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col11a2Q64739 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col11a2Q64739 Gm18304-201ENSMUST00000189162 546 ntBASIC15.27■□□□□ 0.04
Col11a2Q64739 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.27■□□□□ 0.04
Col11a2Q64739 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.27■□□□□ 0.04
Col11a2Q64739 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col11a2Q64739 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col11a2Q64739 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col11a2Q64739 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col11a2Q64739 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col11a2Q64739 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.27■□□□□ 0.03
Col11a2Q64739 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col11a2Q64739 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col11a2Q64739 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col11a2Q64739 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col11a2Q64739 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col11a2Q64739 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
Col11a2Q64739 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col11a2Q64739 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.26■□□□□ 0.03
Col11a2Q64739 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm20392-201ENSMUST00000173047 701 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Col11a2Q64739 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm9873-201ENSMUST00000063891 1097 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Col11a2Q64739 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Col11a2Q64739 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm26286-201ENSMUST00000104166 134 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC15.26■□□□□ 0.03
Col11a2Q64739 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm23045-201ENSMUST00000175041 96 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col11a2Q64739 Gm44329-201ENSMUST00000197469 112 ntBASIC15.26■□□□□ 0.03
Col11a2Q64739 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col11a2Q64739 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col11a2Q64739 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.25■□□□□ 0.03
Col11a2Q64739 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.25■□□□□ 0.03
Col11a2Q64739 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.25■□□□□ 0.03
Col11a2Q64739 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.25■□□□□ 0.03
Col11a2Q64739 Gm28388-201ENSMUST00000186262 437 ntBASIC15.25■□□□□ 0.03
Col11a2Q64739 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15.25■□□□□ 0.03
Col11a2Q64739 Gm9797-202ENSMUST00000218003 294 ntBASIC15.25■□□□□ 0.03
Col11a2Q64739 Prrxl1-205ENSMUST00000228878 723 ntBASIC15.25■□□□□ 0.03
Col11a2Q64739 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a2Q64739 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms