Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.81□□□□□ -0.52
VcanQ62059 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.81□□□□□ -0.52
VcanQ62059 Gm8018-201ENSMUST00000173536 789 ntBASIC11.81□□□□□ -0.52
VcanQ62059 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
VcanQ62059 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.81□□□□□ -0.52
VcanQ62059 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VcanQ62059 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VcanQ62059 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Gm24248-201ENSMUST00000157321 322 ntBASIC11.8□□□□□ -0.52
VcanQ62059 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VcanQ62059 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.8□□□□□ -0.52
VcanQ62059 Gm35713-201ENSMUST00000210516 199 ntBASIC11.8□□□□□ -0.52
VcanQ62059 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VcanQ62059 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VcanQ62059 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.8□□□□□ -0.52
VcanQ62059 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
VcanQ62059 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.8□□□□□ -0.52
VcanQ62059 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.8□□□□□ -0.52
VcanQ62059 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.8□□□□□ -0.52
VcanQ62059 Gm45481-201ENSMUST00000209717 877 ntBASIC11.8□□□□□ -0.52
VcanQ62059 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.8□□□□□ -0.52
VcanQ62059 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VcanQ62059 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.79□□□□□ -0.52
VcanQ62059 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.79□□□□□ -0.52
VcanQ62059 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Gm21092-201ENSMUST00000178995 955 ntBASIC11.79□□□□□ -0.52
VcanQ62059 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.79□□□□□ -0.52
VcanQ62059 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Gm5513-201ENSMUST00000072982 1218 ntBASIC11.79□□□□□ -0.52
VcanQ62059 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
VcanQ62059 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
VcanQ62059 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
VcanQ62059 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
VcanQ62059 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.79□□□□□ -0.52
VcanQ62059 Gm26368-201ENSMUST00000157826 118 ntBASIC11.79□□□□□ -0.52
VcanQ62059 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Gm19009-201ENSMUST00000223072 823 ntBASIC11.79□□□□□ -0.52
VcanQ62059 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.79□□□□□ -0.52
VcanQ62059 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Gm14999-201ENSMUST00000121039 624 ntBASIC11.79□□□□□ -0.52
VcanQ62059 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.79□□□□□ -0.52
VcanQ62059 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Mir7677-201ENSMUST00000184226 67 ntBASIC11.79□□□□□ -0.52
VcanQ62059 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.79□□□□□ -0.52
VcanQ62059 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.79□□□□□ -0.52
VcanQ62059 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.79□□□□□ -0.52
VcanQ62059 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VcanQ62059 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.78□□□□□ -0.52
VcanQ62059 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.78□□□□□ -0.52
VcanQ62059 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.78□□□□□ -0.52
VcanQ62059 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
VcanQ62059 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.78□□□□□ -0.52
VcanQ62059 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.78□□□□□ -0.52
VcanQ62059 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VcanQ62059 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms