Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Notch3Q61982 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Notch3Q61982 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Notch3Q61982 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.96□□□□□ -0.82
Notch3Q61982 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Notch3Q61982 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Notch3Q61982 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Notch3Q61982 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Notch3Q61982 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.95□□□□□ -0.82
Notch3Q61982 Gm9445-201ENSMUST00000207454 1285 ntBASIC9.95□□□□□ -0.82
Notch3Q61982 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Notch3Q61982 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.95□□□□□ -0.82
Notch3Q61982 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Notch3Q61982 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC9.95□□□□□ -0.82
Notch3Q61982 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Notch3Q61982 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Gm11222-201ENSMUST00000119005 738 ntBASIC9.95□□□□□ -0.82
Notch3Q61982 Gm11591-201ENSMUST00000120063 702 ntBASIC9.95□□□□□ -0.82
Notch3Q61982 Gm24548-201ENSMUST00000158650 108 ntBASIC9.95□□□□□ -0.82
Notch3Q61982 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC9.95□□□□□ -0.82
Notch3Q61982 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Rps4l-202ENSMUST00000204242 789 ntBASIC9.95□□□□□ -0.82
Notch3Q61982 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Notch3Q61982 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Notch3Q61982 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Notch3Q61982 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.94□□□□□ -0.82
Notch3Q61982 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Notch3Q61982 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Notch3Q61982 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC9.94□□□□□ -0.82
Notch3Q61982 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Gm24255-201ENSMUST00000104481 128 ntBASIC9.94□□□□□ -0.82
Notch3Q61982 Gm15770-201ENSMUST00000117498 584 ntBASIC9.94□□□□□ -0.82
Notch3Q61982 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.94□□□□□ -0.82
Notch3Q61982 Gm2991-201ENSMUST00000173338 480 ntBASIC9.94□□□□□ -0.82
Notch3Q61982 Gm20482-202ENSMUST00000174729 825 ntBASIC9.94□□□□□ -0.82
Notch3Q61982 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.94□□□□□ -0.82
Notch3Q61982 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Notch3Q61982 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.94□□□□□ -0.82
Notch3Q61982 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Notch3Q61982 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.94□□□□□ -0.82
Notch3Q61982 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Notch3Q61982 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Notch3Q61982 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Gm43423-201ENSMUST00000198390 2094 ntBASIC9.94□□□□□ -0.82
Notch3Q61982 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Notch3Q61982 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Notch3Q61982 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Gm2445-201ENSMUST00000182798 989 ntBASIC9.94□□□□□ -0.82
Notch3Q61982 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.94□□□□□ -0.82
Notch3Q61982 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.94□□□□□ -0.82
Notch3Q61982 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.94□□□□□ -0.82
Notch3Q61982 AC131690.1-201ENSMUST00000218406 374 ntBASIC9.94□□□□□ -0.82
Notch3Q61982 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Notch3Q61982 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Notch3Q61982 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms