Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sox17Q61473 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox17Q61473 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.11□□□□□ -0.47
Sox17Q61473 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.1□□□□□ -0.47
Sox17Q61473 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sox17Q61473 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.1□□□□□ -0.47
Sox17Q61473 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sox17Q61473 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.1□□□□□ -0.47
Sox17Q61473 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Sox17Q61473 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox17Q61473 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox17Q61473 Gm25144-201ENSMUST00000179561 110 ntBASIC12.1□□□□□ -0.47
Sox17Q61473 Gm25352-201ENSMUST00000179815 110 ntBASIC12.1□□□□□ -0.47
Sox17Q61473 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.1□□□□□ -0.47
Sox17Q61473 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.1□□□□□ -0.47
Sox17Q61473 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.1□□□□□ -0.47
Sox17Q61473 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sox17Q61473 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.1□□□□□ -0.47
Sox17Q61473 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sox17Q61473 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Sox17Q61473 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox17Q61473 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sox17Q61473 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Sox17Q61473 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.09□□□□□ -0.47
Sox17Q61473 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Sox17Q61473 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.09□□□□□ -0.47
Sox17Q61473 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.09□□□□□ -0.47
Sox17Q61473 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Gm4875-201ENSMUST00000118257 786 ntBASIC12.09□□□□□ -0.47
Sox17Q61473 Gm12485-201ENSMUST00000119641 291 ntBASIC12.09□□□□□ -0.47
Sox17Q61473 Gm14822-201ENSMUST00000122247 291 ntBASIC12.09□□□□□ -0.47
Sox17Q61473 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Sox17Q61473 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox17Q61473 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.09□□□□□ -0.47
Sox17Q61473 Gm27618-201ENSMUST00000183671 60 ntBASIC12.09□□□□□ -0.47
Sox17Q61473 Gm27321-201ENSMUST00000185021 205 ntBASIC12.09□□□□□ -0.47
Sox17Q61473 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.09□□□□□ -0.47
Sox17Q61473 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sox17Q61473 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sox17Q61473 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox17Q61473 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.09□□□□□ -0.47
Sox17Q61473 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sox17Q61473 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox17Q61473 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox17Q61473 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms