Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.03□□□□□ -0.32
Six4Q61321 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Six4Q61321 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Six4Q61321 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.03□□□□□ -0.32
Six4Q61321 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Six4Q61321 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.03□□□□□ -0.32
Six4Q61321 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Six4Q61321 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Six4Q61321 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.03□□□□□ -0.32
Six4Q61321 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six4Q61321 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six4Q61321 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six4Q61321 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six4Q61321 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six4Q61321 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six4Q61321 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six4Q61321 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six4Q61321 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Six4Q61321 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Six4Q61321 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Six4Q61321 Gm11591-201ENSMUST00000120063 702 ntBASIC13.02□□□□□ -0.33
Six4Q61321 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.02□□□□□ -0.33
Six4Q61321 Gm25261-201ENSMUST00000157416 134 ntBASIC13.02□□□□□ -0.33
Six4Q61321 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.02□□□□□ -0.33
Six4Q61321 Gm25927-201ENSMUST00000175058 117 ntBASIC13.02□□□□□ -0.33
Six4Q61321 Gm27514-201ENSMUST00000183692 110 ntBASIC13.02□□□□□ -0.33
Six4Q61321 Gm8099-201ENSMUST00000200510 742 ntBASIC13.02□□□□□ -0.33
Six4Q61321 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.02□□□□□ -0.33
Six4Q61321 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.02□□□□□ -0.33
Six4Q61321 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Snora73a-201ENSMUST00000082453 205 ntBASIC13.02□□□□□ -0.33
Six4Q61321 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Six4Q61321 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Six4Q61321 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Six4Q61321 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.02□□□□□ -0.33
Six4Q61321 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Six4Q61321 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.02□□□□□ -0.33
Six4Q61321 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six4Q61321 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Six4Q61321 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Six4Q61321 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Six4Q61321 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.01□□□□□ -0.33
Six4Q61321 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Six4Q61321 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.01□□□□□ -0.33
Six4Q61321 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.01□□□□□ -0.33
Six4Q61321 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Gm23363-201ENSMUST00000175024 79 ntBASIC13.01□□□□□ -0.33
Six4Q61321 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.01□□□□□ -0.33
Six4Q61321 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.01□□□□□ -0.33
Six4Q61321 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Six4Q61321 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.01□□□□□ -0.33
Six4Q61321 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Six4Q61321 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.01□□□□□ -0.33
Six4Q61321 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.01□□□□□ -0.33
Six4Q61321 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.01□□□□□ -0.33
Six4Q61321 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six4Q61321 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Six4Q61321 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Six4Q61321 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six4Q61321 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms