Protein–RNA interactions for Protein: Q3UD01

Atxn7l3b, Ataxin-7-like protein 3B, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7l3bQ3UD01 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn7l3bQ3UD01 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn7l3bQ3UD01 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.1□□□□□ -0.31
Atxn7l3bQ3UD01 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn7l3bQ3UD01 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Mir6392-201ENSMUST00000184924 108 ntBASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Gm38223-201ENSMUST00000194484 695 ntBASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Gm43433-201ENSMUST00000196573 481 ntBASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn7l3bQ3UD01 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.08□□□□□ -0.31
Atxn7l3bQ3UD01 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn7l3bQ3UD01 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn7l3bQ3UD01 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn7l3bQ3UD01 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn7l3bQ3UD01 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn7l3bQ3UD01 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn7l3bQ3UD01 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn7l3bQ3UD01 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn7l3bQ3UD01 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn7l3bQ3UD01 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn7l3bQ3UD01 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Atxn7l3bQ3UD01 Gm12341-201ENSMUST00000119724 503 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms