Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Scn1bP97952 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.81□□□□□ -0.52
Scn1bP97952 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.81□□□□□ -0.52
Scn1bP97952 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Gm43474-201ENSMUST00000196415 774 ntBASIC11.81□□□□□ -0.52
Scn1bP97952 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Gm19931-201ENSMUST00000198920 368 ntBASIC11.81□□□□□ -0.52
Scn1bP97952 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Scn1bP97952 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Scn1bP97952 Mir125a-201ENSMUST00000083545 68 ntBASIC11.81□□□□□ -0.52
Scn1bP97952 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn1bP97952 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.81□□□□□ -0.52
Scn1bP97952 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.81□□□□□ -0.52
Scn1bP97952 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn1bP97952 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.8□□□□□ -0.52
Scn1bP97952 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Scn1bP97952 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Scn1bP97952 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Scn1bP97952 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Scn1bP97952 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn1bP97952 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Gm45453-201ENSMUST00000211758 853 ntBASIC11.8□□□□□ -0.52
Scn1bP97952 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn1bP97952 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn1bP97952 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Scn1bP97952 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.8□□□□□ -0.52
Scn1bP97952 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Scn1bP97952 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Scn1bP97952 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn1bP97952 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.8□□□□□ -0.52
Scn1bP97952 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn1bP97952 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Scn1bP97952 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Scn1bP97952 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.79□□□□□ -0.52
Scn1bP97952 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.79□□□□□ -0.52
Scn1bP97952 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.79□□□□□ -0.52
Scn1bP97952 Gm18766-201ENSMUST00000189811 808 ntBASIC11.79□□□□□ -0.52
Scn1bP97952 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Scn1bP97952 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Scn1bP97952 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Scn1bP97952 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scn1bP97952 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms