Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43bP86448 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim43bP86448 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim43bP86448 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.31□□□□□ -0.28
Trim43bP86448 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.31□□□□□ -0.28
Trim43bP86448 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim43bP86448 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.31□□□□□ -0.28
Trim43bP86448 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim43bP86448 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.31□□□□□ -0.28
Trim43bP86448 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim43bP86448 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.31□□□□□ -0.28
Trim43bP86448 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim43bP86448 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trim43bP86448 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43bP86448 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim43bP86448 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim43bP86448 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.3□□□□□ -0.28
Trim43bP86448 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim43bP86448 Gm12138-201ENSMUST00000122180 951 ntBASIC13.3□□□□□ -0.28
Trim43bP86448 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim43bP86448 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim43bP86448 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim43bP86448 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim43bP86448 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim43bP86448 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim43bP86448 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trim43bP86448 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim43bP86448 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim43bP86448 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.3□□□□□ -0.28
Trim43bP86448 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim43bP86448 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim43bP86448 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Trim43bP86448 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim43bP86448 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms