Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sf3b6P59708 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.49□□□□□ -0.57
Sf3b6P59708 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Sf3b6P59708 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sf3b6P59708 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3b6P59708 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.48□□□□□ -0.57
Sf3b6P59708 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.48□□□□□ -0.57
Sf3b6P59708 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sf3b6P59708 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.48□□□□□ -0.57
Sf3b6P59708 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.48□□□□□ -0.57
Sf3b6P59708 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.48□□□□□ -0.57
Sf3b6P59708 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Sf3b6P59708 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.48□□□□□ -0.57
Sf3b6P59708 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.48□□□□□ -0.57
Sf3b6P59708 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.48□□□□□ -0.57
Sf3b6P59708 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.48□□□□□ -0.57
Sf3b6P59708 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sf3b6P59708 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sf3b6P59708 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3b6P59708 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.47□□□□□ -0.57
Sf3b6P59708 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.47□□□□□ -0.57
Sf3b6P59708 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sf3b6P59708 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.47□□□□□ -0.57
Sf3b6P59708 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.47□□□□□ -0.57
Sf3b6P59708 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.47□□□□□ -0.57
Sf3b6P59708 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.47□□□□□ -0.57
Sf3b6P59708 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.47□□□□□ -0.57
Sf3b6P59708 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Sf3b6P59708 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.47□□□□□ -0.57
Sf3b6P59708 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.47□□□□□ -0.57
Sf3b6P59708 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sf3b6P59708 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3b6P59708 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sf3b6P59708 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sf3b6P59708 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms