Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tpm1P58771 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Tpm1P58771 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tpm1P58771 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Tpm1P58771 Gm11594-201ENSMUST00000122313 162 ntBASIC14.42□□□□□ -0.1
Tpm1P58771 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.42□□□□□ -0.1
Tpm1P58771 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tpm1P58771 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.42□□□□□ -0.1
Tpm1P58771 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.42□□□□□ -0.1
Tpm1P58771 Gm2756-201ENSMUST00000195851 400 ntBASIC14.42□□□□□ -0.1
Tpm1P58771 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.42□□□□□ -0.1
Tpm1P58771 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.42□□□□□ -0.1
Tpm1P58771 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.42□□□□□ -0.1
Tpm1P58771 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tpm1P58771 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tpm1P58771 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.41□□□□□ -0.1
Tpm1P58771 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tpm1P58771 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Tpm1P58771 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Tpm1P58771 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Tpm1P58771 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Gm27321-201ENSMUST00000185021 205 ntBASIC14.41□□□□□ -0.1
Tpm1P58771 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Gm6888-201ENSMUST00000221983 706 ntBASIC14.41□□□□□ -0.1
Tpm1P58771 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Gm5161-201ENSMUST00000075243 853 ntBASIC14.41□□□□□ -0.1
Tpm1P58771 Gm24447-201ENSMUST00000083977 338 ntBASIC14.41□□□□□ -0.1
Tpm1P58771 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tpm1P58771 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Tpm1P58771 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Tpm1P58771 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Tpm1P58771 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tpm1P58771 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.4□□□□□ -0.1
Tpm1P58771 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.4□□□□□ -0.1
Tpm1P58771 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.4□□□□□ -0.1
Tpm1P58771 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.4□□□□□ -0.1
Tpm1P58771 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.4□□□□□ -0.1
Tpm1P58771 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tpm1P58771 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Tpm1P58771 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tpm1P58771 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.4□□□□□ -0.1
Tpm1P58771 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.4□□□□□ -0.1
Tpm1P58771 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.4□□□□□ -0.1
Tpm1P58771 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.4□□□□□ -0.1
Tpm1P58771 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.4□□□□□ -0.1
Tpm1P58771 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms