Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Gm14274-201ENSMUST00000117182 615 ntBASIC12.5□□□□□ -0.41
Lbx1P52955 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.5□□□□□ -0.41
Lbx1P52955 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Lbx1P52955 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.5□□□□□ -0.41
Lbx1P52955 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.5□□□□□ -0.41
Lbx1P52955 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.5□□□□□ -0.41
Lbx1P52955 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Gm22058-201ENSMUST00000083393 310 ntBASIC12.5□□□□□ -0.41
Lbx1P52955 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.5□□□□□ -0.41
Lbx1P52955 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Lbx1P52955 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lbx1P52955 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Lbx1P52955 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.49□□□□□ -0.41
Lbx1P52955 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lbx1P52955 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.49□□□□□ -0.41
Lbx1P52955 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.49□□□□□ -0.41
Lbx1P52955 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lbx1P52955 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.49□□□□□ -0.41
Lbx1P52955 Gm13022-201ENSMUST00000121181 285 ntBASIC12.49□□□□□ -0.41
Lbx1P52955 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.49□□□□□ -0.41
Lbx1P52955 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.49□□□□□ -0.41
Lbx1P52955 Mir1956-201ENSMUST00000157748 65 ntBASIC12.49□□□□□ -0.41
Lbx1P52955 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.49□□□□□ -0.41
Lbx1P52955 AY036118-201ENSMUST00000200021 923 ntBASIC12.49□□□□□ -0.41
Lbx1P52955 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.49□□□□□ -0.41
Lbx1P52955 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.49□□□□□ -0.41
Lbx1P52955 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.49□□□□□ -0.41
Lbx1P52955 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.49□□□□□ -0.41
Lbx1P52955 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.49□□□□□ -0.41
Lbx1P52955 Gm21811-201ENSMUST00000096485 930 ntBASIC12.49□□□□□ -0.41
Lbx1P52955 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lbx1P52955 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lbx1P52955 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.48□□□□□ -0.41
Lbx1P52955 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.48□□□□□ -0.41
Lbx1P52955 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Lbx1P52955 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lbx1P52955 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lbx1P52955 Gm12501-201ENSMUST00000119163 529 ntBASIC12.48□□□□□ -0.41
Lbx1P52955 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.48□□□□□ -0.41
Lbx1P52955 Gm1848-201ENSMUST00000120711 789 ntBASIC12.48□□□□□ -0.41
Lbx1P52955 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lbx1P52955 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms