Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ClgnP52194 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
ClgnP52194 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
ClgnP52194 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClgnP52194 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.22□□□□□ -0.29
ClgnP52194 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.21□□□□□ -0.29
ClgnP52194 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ClgnP52194 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.21□□□□□ -0.29
ClgnP52194 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.21□□□□□ -0.29
ClgnP52194 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ClgnP52194 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.21□□□□□ -0.29
ClgnP52194 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.21□□□□□ -0.29
ClgnP52194 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.21□□□□□ -0.29
ClgnP52194 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClgnP52194 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClgnP52194 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ClgnP52194 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ClgnP52194 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClgnP52194 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClgnP52194 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
ClgnP52194 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClgnP52194 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClgnP52194 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ClgnP52194 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Gm13689-201ENSMUST00000119360 685 ntBASIC13.2□□□□□ -0.3
ClgnP52194 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.2□□□□□ -0.3
ClgnP52194 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.2□□□□□ -0.3
ClgnP52194 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.2□□□□□ -0.3
ClgnP52194 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.2□□□□□ -0.3
ClgnP52194 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ClgnP52194 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ClgnP52194 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ClgnP52194 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
ClgnP52194 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.2□□□□□ -0.3
ClgnP52194 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ClgnP52194 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ClgnP52194 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ClgnP52194 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ClgnP52194 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClgnP52194 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ClgnP52194 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ClgnP52194 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.19□□□□□ -0.3
ClgnP52194 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ClgnP52194 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms